Segmentation module

Classes

class fast::CenterlineExtraction

Extract centerline from 3D image segmentation.

class fast::EulerGradientVectorFlow

Gradient vector flow using Euler method.

class fast::MultigridGradientVectorFlow

Gradient vector flow using the multigrid method.

class fast::KalmanFilterModelSegmentation

Kalman filter deformable model segmentation.

class fast::LevelSetSegmentation

Level set image segmentation.

class fast::LungSegmentation

Segment the lung, airways and blood vessels from a CT using seeded region growing and morpohology.

class fast::MeshToSegmentation

Converts a line (2D) or triangle (3D) mesh to a segmentation image.

class fast::Dilation

Perform binary dilation with disk structuring element.

class fast::Erosion

Perform binary erosion with disk structuring element.

struct fast::Region

Segmentation region struct.

class fast::RegionProperties

Simple data object of list of regions.

class fast::RemoveRegions

Remove small, large or all but largest regions from a segmentation image.

class fast::SeededRegionGrowing

Segmentation by seeded region growing.

class fast::SegmentationVolumeReconstructor

Reconstruct a stream of 2D segmentation images into a 3D segmentation image.

class fast::Skeletonization

Extract the skeleton of 2D segmentation as a 2D image.

class fast::SurfaceExtraction

Extract triangle mesh from a 3D Image (volume)

class fast::BinaryThresholding

Segmentation using a threshold value.

class fast::OtsuThresholding

Otsu thresholding segmentation method.

class fast::TissueSegmentation

Segment tissue from a WSI.

class fast::TubeSegmentationAndCenterlineExtraction

Segmentation and centerline extraction of tubular structures.

Typedefs

using LabelMap = std::map<uint, uint>

Change labels in a segmentation image.

Typedef documentation